查找回文..........................................................................................................................................................................................................................................................................................................................................................................................................................11 GENETIC_CODE....................................................................................................................................................................................................................................................................................................................................................................................14 获取序列....................................................................................................................................................................................................................................................................................................................................................................14 获取序列.................................................................................................................................................................................................................................................................................................................................................................................................................... . ... . . . . . . . . . . . . 19 IUPAC_CODE_MAP . ... .................................................................................................................................................................................................................................................................. 23 longestConsecutive .................................................................................................................................................................................................................................................................................................. 29 lowlevel-matching .................................................................................................................................................................................................................................................................................................................................................................................................. 30 MaskedXString-class .................................................................................................................................................................. . ... ................. ... . . . 47 matchPDict-inexact . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ... . . . . . . . . . . . . . 67 removed_to_pwalign . . . . . . . . . . . . . . . . . . . . 68 MultipleAlignment-class . . . . . . . . . . . . . . . . . . . . 69 needwunsQS . . . . . . . . . . . . . . . ... ..................................................................................................................................................................................................................................................................................................81 pmatchPattern ..................................................................................................................................................................................................................................................................................................................................................................................................85 preset_scoring_matrices ..................................................................................................................................................................................................................................................................................................................................................................86 QualityScaledXStringSet 类。..................................................................................................................................................................................................................................................................................86 replaceAt ........................................................................................................................................................................................................................................................................................................................89 replaceLetterAt ........................................................................................................................................................................................................................................................................................................................................................93 reverse Complement .. ..................................................................................................................................................................................................................................................................................................................................................................................................................................95 RNAString 类 ..................................................................................................................................................................................................................................................................................................................................................................................................................97 seqinfo 方法 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................97 seqinfo 方法 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 99 至复杂 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 104 xscat . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 107 XString 类 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 108 XStringPartialMatches 类 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 110 XStringQuality-类. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 111 XStringSet-类. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 113 XStringSet-比较. . . . . . . . . . . . . . . . . ..................................................................................................................................................................................................119 XStringSet-io ........................................................................................................................................................................................................................................122 XStringSetList-class ........................................................................................................................................................................................................................................................129..................................................................................................................................................................................119 XStringSet-io ........................................................................................................................................................................................................................122 XStringSetList-类 ........................................................................................................................................................................................................................................129..................................................................................................................................................................................119 XStringSet-io ........................................................................................................................................................................................................................122 XStringSetList-类 ........................................................................................................................................................................................................................................129